Ranking Docking Models by Coevolution Analysis

Ranking World Cup 2014 Football Matches by Data Envelopment Analysis Models with Common Weights

Football is one of the most popular and exciting sports fields throughout the world. Today, in addition to the result, the number of goals and points, attraction and quality of the played matches are important for club management staff, coaching staff, the players and especially the fans. Beside number of goals, there are different criteria such as successful passes, attacks, defenses, tackles ...

Ranking of DMUs by using TOPSIS and dierent ranking models in DEA

Ranking Models in Data Envelopment Analysis

Traditional data envelopment analysis models split decision making units into two basic groups, efficient and inefficient. They are based on solving linear optimization problems and currently they represent very popular tool for efficiency and performance evaluation. Efficiency scores of inefficient units allows their ranking but efficient units cannot be ranked directly because of their maximu...

Improving Protein Docking with Constraint Programming and Coevolution Data

Background: Constraint programming (CP) is usually seen as a rigid approach, focusing on crisp, precise, distinctions between what is allowed as a solution and what is not. At first sight, this makes it seem inadequate for bioinformatics applications that rely mostly on statistical parameters and optimization. The prediction of protein interactions, or protein docking, is one such application. ...

CONSRANK: a server for the analysis, comparison and ranking of docking models based on inter-residue contacts

SUMMARY Herein, we present CONSRANK, a web tool for analyzing, comparing and ranking protein-protein and protein-nucleic acid docking models, based on the conservation of inter-residue contacts and its visualization in 2D and 3D interactive contact maps. AVAILABILITY AND IMPLEMENTATION CONSRANK is accessible as a public web tool at https://www.molnac.unisa.it/BioTools/consrank/. CONTACT rom...